splicelogic: transcript sets to splice events2 months ago
Introduction | Quick start | Finding events from transcript sets | Finding events from DTU results | Input data | The find_*() functions | Output format | Finding splicing events | Finding events from transcript sets | Input format | A synthetic exon set | Building the input by partition | Finding events | Finding events after DTU analysis | Jones et al mouse long read dataset | Loading example data | Preprocessing input data | Finding individual events | Finding all events | Upstream DTU methods | Collapsing redundant events | Identifying complex events | Exon ranges input for splicelogic | Using prepare_exons() | Manual construction | Related tools | Session info